HL_4V4P_025

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

GGCUUAGAAGCAGCC

Length

15 nucleotides

Bulged bases

4V4P|1|AA|A|1067, 4V4P|1|AA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|G|1062
4V4P|1|AA|G|1063
4V4P|1|AA|C|1064
4V4P|1|AA|U|1065
4V4P|1|AA|U|1066
4V4P|1|AA|A|1067
4V4P|1|AA|G|1068
4V4P|1|AA|A|1069
4V4P|1|AA|A|1070
4V4P|1|AA|G|1071
4V4P|1|AA|C|1072
4V4P|1|AA|A|1073
4V4P|1|AA|G|1074
4V4P|1|AA|C|1075
4V4P|1|AA|C|1076

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AL

50S ribosomal protein L11

Chain AP

50S ribosomal protein L16

Chain AV

50S general stress protein CTC (L25)