HL_4V4P_063

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

GCGUCAAGC

Length

9 nucleotides

Bulged bases

4V4P|1|AA|G|2795

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4P_063 not in the Motif Atlas

Homologous match to HL_7A0S_066

Geometric discrepancy: 0.4437

The information below is about HL_7A0S_066

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|G|2793
4V4P|1|AA|C|2794
4V4P|1|AA|G|2795
4V4P|1|AA|U|2797
4V4P|1|AA|C|2798
4V4P|1|AA|A|2799
4V4P|1|AA|A|2801
4V4P|1|AA|G|2802
4V4P|1|AA|C|2803

Current chains

Chain AA

23S ribosomal RNA

Nearby chains