HL_4V4P_097

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

GAUCAGCAUGC*C

Length

12 nucleotides

Bulged bases

4V4P|1|BA|C|1362, 4V4P|1|BA|U|1364

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|BA|G|1356
4V4P|1|BA|A|1357
4V4P|1|BA|U|1358
4V4P|1|BA|C|1359
4V4P|1|BA|A|1360
4V4P|1|BA|G|1361
4V4P|1|BA|C|1362
4V4P|1|BA|A|1363
4V4P|1|BA|U|1364
4V4P|1|BA|G|1365
4V4P|1|BA|C|1366
*
4V4P|1|BA|C|1366

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BL

30S ribosomal protein S9

Chain BM

30S ribosomal protein S10

Chain BP

30S ribosomal protein S13

Chain BQ

30S ribosomal protein S14

Chain BX

30S ribosomal protein Thx