HL_4V4P_114

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

CCCGUAACUUCGGGAGAAGGG

Length

21 nucleotides

Bulged bases

4V4P|1|AA|U|1693, 4V4P|1|AA|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|C|1684
4V4P|1|AA|C|1685
4V4P|1|AA|C|1686
4V4P|1|AA|G|1687
4V4P|1|AA|U|1688
4V4P|1|AA|A|1689
4V4P|1|AA|A|1690
4V4P|1|AA|C|1691
4V4P|1|AA|U|1692
4V4P|1|AA|U|1693
4V4P|1|AA|C|1694
4V4P|1|AA|G|1695
4V4P|1|AA|G|1696
4V4P|1|AA|G|1697
4V4P|1|AA|A|1698
4V4P|1|AA|G|1699
4V4P|1|AA|A|1700
4V4P|1|AA|A|1701
4V4P|1|AA|G|1702
4V4P|1|AA|G|1703
4V4P|1|AA|G|1704

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AD

50S ribosomal protein L2

Chain BA

Small subunit ribosomal RNA; SSU rRNA