HL_4V4P_117

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

CCGAGCGUCCACAGCGGCG

Length

19 nucleotides

Bulged bases

4V4P|1|AA|A|2476, 4V4P|1|AA|C|2477

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|C|2466
4V4P|1|AA|C|2467
4V4P|1|AA|G|2468
4V4P|1|AA|A|2469
4V4P|1|AA|G|2470
4V4P|1|AA|C|2471
4V4P|1|AA|G|2472
4V4P|1|AA|U|2473
4V4P|1|AA|C|2474
4V4P|1|AA|C|2475
4V4P|1|AA|A|2476
4V4P|1|AA|C|2477
4V4P|1|AA|A|2478
4V4P|1|AA|G|2479
4V4P|1|AA|C|2480
4V4P|1|AA|G|2481
4V4P|1|AA|G|2482
4V4P|1|AA|C|2483
4V4P|1|AA|G|2484

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain A9

50S ribosomal protein L36

Chain AP

50S ribosomal protein L16

Chain BB

Transfer RNA; tRNA