HL_4V4P_121
3D structure
- PDB id
- 4V4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of 70S ribosome with thrS operator and tRNAs.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5.5 Å
Loop
- Sequence
- GUUUGAUCCUGGC
- Length
- 13 nucleotides
- Bulged bases
- 4V4P|1|BA|U|14
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4P_121 not in the Motif Atlas
- Homologous match to HL_4LFB_001
- Geometric discrepancy: 0.5101
- The information below is about HL_4LFB_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_73535.1
- Basepair signature
- cWW-tHW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
4V4P|1|BA|G|11
4V4P|1|BA|U|12
4V4P|1|BA|U|13
4V4P|1|BA|U|14
4V4P|1|BA|G|15
4V4P|1|BA|A|16
4V4P|1|BA|U|17
4V4P|1|BA|C|18
4V4P|1|BA|C|19
4V4P|1|BA|U|20
4V4P|1|BA|G|21
4V4P|1|BA|G|22
4V4P|1|BA|C|23
Current chains
- Chain BA
- 16S rRNA
Nearby chains
- Chain B1
- thrS mRNA operator
- Chain BH
- 30S ribosomal protein S5
- Chain BO
- 30S ribosomal protein S12
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