HL_4V4P_123

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

GCGGUGAAAUGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|BA|G|688
4V4P|1|BA|C|689
4V4P|1|BA|G|690
4V4P|1|BA|G|691
4V4P|1|BA|U|692
4V4P|1|BA|G|693
4V4P|1|BA|A|694
4V4P|1|BA|A|695
4V4P|1|BA|A|696
4V4P|1|BA|U|697
4V4P|1|BA|G|698
4V4P|1|BA|C|699

Current chains

Chain BA

16S rRNA

Nearby chains

Chain AA

Large subunit ribosomal RNA; LSU rRNA

Chain B1

thrS mRNA operator

Chain BJ

30S ribosomal protein S7

Chain BN

30S ribosomal protein S11