HL_4V4Q_128

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

4V4Q|1|CA|G|1094

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06138.1

Basepair signature

cWW-cWW-R-R-R

Number of instances in this motif group

18

Unit IDs

4V4Q|1|CA|G|1089
4V4Q|1|CA|U|1090
4V4Q|1|CA|U|1091
4V4Q|1|CA|A|1092
4V4Q|1|CA|A|1093
4V4Q|1|CA|G|1094
4V4Q|1|CA|U|1095
4V4Q|1|CA|C|1096

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CB

30S ribosomal protein S2

Chain CG

30S ribosomal protein S7