HL_4V4Q_133

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GAUCAGAAUGC

Length

11 nucleotides

Bulged bases

4V4Q|1|CA|U|1364

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_22130.1

Basepair signature

cWW-cWW-R-R-R-R-R

Number of instances in this motif group

7

Unit IDs

4V4Q|1|CA|G|1356
4V4Q|1|CA|A|1357
4V4Q|1|CA|U|1358
4V4Q|1|CA|C|1359
4V4Q|1|CA|A|1360
4V4Q|1|CA|G|1361
4V4Q|1|CA|A|1362
4V4Q|1|CA|A|1363
4V4Q|1|CA|U|1364
4V4Q|1|CA|G|1365
4V4Q|1|CA|C|1366

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CI

30S ribosomal protein S9

Chain CJ

30S ribosomal protein S10

Chain CN

30S ribosomal protein S14