HL_4V4Q_167

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

CUUAUG

Length

6 nucleotides

Bulged bases

4V4Q|1|DB|A|1175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4Q_167 not in the Motif Atlas

Geometric match to HL_4WRT_001

Geometric discrepancy: 0.3843

The information below is about HL_4WRT_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_49922.3

Basepair signature

cWW-F-F-F

Number of instances in this motif group

11

Unit IDs

4V4Q|1|DB|C|1172
4V4Q|1|DB|U|1173
4V4Q|1|DB|U|1174
4V4Q|1|DB|A|1175
4V4Q|1|DB|U|1176
4V4Q|1|DB|G|1177

Current chains

Chain DB

23S ribosomal RNA

Nearby chains