3D structure

PDB id
4V4S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the whole ribosomal complex.
Experimental method
X-RAY DIFFRACTION
Resolution
6.76 Å

Loop

Sequence
CUUUG
Length
5 nucleotides
Bulged bases
4V4S|1|AA|U|202
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V4S_005 not in the Motif Atlas
Homologous match to HL_4LFB_005
Geometric discrepancy: 0.3441
The information below is about HL_4LFB_005
Detailed Annotation
Mini UNCG
Broad Annotation
No text annotation
Motif group
HL_48778.2
Basepair signature
cWW-F
Number of instances in this motif group
46

Unit IDs

4V4S|1|AA|C|201
4V4S|1|AA|U|202
4V4S|1|AA|U|203
4V4S|1|AA|U|204
4V4S|1|AA|G|216

Current chains

Chain AA
16S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0874 s