HL_4V4S_122

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

GCUGAAAGCAUCUAAGC

Length

17 nucleotides

Bulged bases

4V4S|1|BA|A|2749, 4V4S|1|BA|A|2750, 4V4S|1|BA|G|2751, 4V4S|1|BA|C|2752, 4V4S|1|BA|A|2753, 4V4S|1|BA|C|2755, 4V4S|1|BA|A|2757

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|G|2744
4V4S|1|BA|C|2745
4V4S|1|BA|U|2746
4V4S|1|BA|G|2747
4V4S|1|BA|A|2748
4V4S|1|BA|A|2749
4V4S|1|BA|A|2750
4V4S|1|BA|G|2751
4V4S|1|BA|C|2752
4V4S|1|BA|A|2753
4V4S|1|BA|U|2754
4V4S|1|BA|C|2755
4V4S|1|BA|U|2756
4V4S|1|BA|A|2757
4V4S|1|BA|A|2758
4V4S|1|BA|G|2759
4V4S|1|BA|C|2760

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B9

50S ribosomal protein L36

Chain BH

50S ribosomal protein L6

Chain BN

50S ribosomal protein L13