HL_4V4W_113

3D structure

PDB id

4V4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GGGUCGACUU

Length

10 nucleotides

Bulged bases

4V4W|1|B0|G|891

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4W|1|B0|G|881
4V4W|1|B0|G|882
4V4W|1|B0|G|883
4V4W|1|B0|U|884
4V4W|1|B0|C|885
4V4W|1|B0|G|891
4V4W|1|B0|A|892
4V4W|1|B0|C|893
4V4W|1|B0|U|894
4V4W|1|B0|U|895

Current chains

Chain B0

23S ribosomal RNA

Nearby chains

Chain AM

30S ribosomal subunit protein S13

Chain AS

30S ribosomal subunit protein S19