HL_4V4X_037
3D structure
- PDB id
- 4V4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5 Å
Loop
- Sequence
- ACUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4X_037 not in the Motif Atlas
- Homologous match to HL_5UD5_002
- Geometric discrepancy: 0.3922
- The information below is about HL_5UD5_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_77082.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4V4X|1|AD|A|31
4V4X|1|AD|C|32
4V4X|1|AD|U|33
4V4X|1|AD|G|34
4V4X|1|AD|A|35
4V4X|1|AD|A|36
4V4X|1|AD|A|37
4V4X|1|AD|A|38
4V4X|1|AD|U|39
Current chains
- Chain AD
- tRNA PHE (unmodified bases)
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AC
- Transfer RNA; tRNA
- Chain AJ
- 30S ribosomal protein S7
- Chain AN
- 30S ribosomal protein S11
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