HL_4V4X_082
3D structure
- PDB id
- 4V4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5 Å
Loop
- Sequence
- UACCAAA
- Length
- 7 nucleotides
- Bulged bases
- 4V4X|1|BA|A|1780, 4V4X|1|BA|C|1781
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4X_082 not in the Motif Atlas
- Geometric match to HL_2Y8W_001
- Geometric discrepancy: 0.1164
- The information below is about HL_2Y8W_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
4V4X|1|BA|U|1779
4V4X|1|BA|A|1780
4V4X|1|BA|C|1781
4V4X|1|BA|C|1782
4V4X|1|BA|A|1783
4V4X|1|BA|A|1784
4V4X|1|BA|A|1785
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B6
- 50S ribosomal protein L34
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