HL_4V4Z_014

3D structure

PDB id

4V4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

Experimental method

X-RAY DIFFRACTION

Resolution

4.51 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

4V4Z|1|AA|U|619

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4Z_014 not in the Motif Atlas

Homologous match to HL_4LFB_014

Geometric discrepancy: 0.2297

The information below is about HL_4LFB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V4Z|1|AA|G|617
4V4Z|1|AA|C|618
4V4Z|1|AA|U|619
4V4Z|1|AA|C|620
4V4Z|1|AA|A|621
4V4Z|1|AA|A|622
4V4Z|1|AA|C|623

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AG

30S ribosomal protein S4

Chain AS

30S ribosomal protein S16