HL_4V4Z_037
3D structure
- PDB id
- 4V4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.51 Å
Loop
- Sequence
- ACUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- 4V4Z|1|AD|G|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V4Z_037 not in the Motif Atlas
- Homologous match to HL_5UD5_002
- Geometric discrepancy: 0.4284
- The information below is about HL_5UD5_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_68642.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
4V4Z|1|AD|A|31
4V4Z|1|AD|C|32
4V4Z|1|AD|U|33
4V4Z|1|AD|G|34
4V4Z|1|AD|A|35
4V4Z|1|AD|A|36
4V4Z|1|AD|A|37
4V4Z|1|AD|A|38
4V4Z|1|AD|U|39
Current chains
- Chain AD
- tRNA PHE (unmodified bases)
Nearby chains
- Chain A1
- mRNA
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AC
- Transfer RNA; tRNA
- Chain AJ
- 30S ribosomal protein S7
- Chain AN
- 30S ribosomal protein S11
Coloring options: