HL_4V4Z_051

3D structure

PDB id

4V4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

Experimental method

X-RAY DIFFRACTION

Resolution

4.51 Å

Loop

Sequence

GACCAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V4Z_051 not in the Motif Atlas

Geometric match to HL_8C3A_022

Geometric discrepancy: 0.2663

The information below is about HL_8C3A_022

Detailed Annotation

Externally structured

Broad Annotation

Externally structured

Motif group

HL_96426.1

Basepair signature

cWW-F

Number of instances in this motif group

4

Unit IDs

4V4Z|1|BA|G|411
4V4Z|1|BA|A|412
4V4Z|1|BA|C|413
4V4Z|1|BA|C|414
4V4Z|1|BA|A|415
4V4Z|1|BA|C|416

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BO

50S RIBOSOMAL PROTEIN L15