HL_4V57_180

3D structure

PDB id

4V57 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUCG

Length

4 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V57_180 not in the Motif Atlas

Homologous match to HL_5J7L_176

Geometric discrepancy: 0.558

The information below is about HL_5J7L_176

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75930.1

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

4V57|1|DB|C|1728
4V57|1|DB|U|1729
4V57|1|DB|C|1730
4V57|1|DB|G|1731

Current chains

Chain DB

23S rRNA

Nearby chains