HL_4V5A_005

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

4V5A|1|AA|U|202, 4V5A|1|AA|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5A_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.5

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

4V5A|1|AA|C|201
4V5A|1|AA|U|202
4V5A|1|AA|U|203
4V5A|1|AA|U|204
4V5A|1|AA|G|216

Current chains

Chain AA

16S ribosomal RNA

Nearby chains