HL_4V5A_138
3D structure
- PDB id
- 4V5A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- AUUGAAAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53597.4
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 31
Unit IDs
4V5A|1|CV|A|30
4V5A|1|CV|U|31
4V5A|1|CV|U|32
4V5A|1|CV|G|33
4V5A|1|CV|A|34
4V5A|1|CV|A|35
4V5A|1|CV|A|36
4V5A|1|CV|A|37
4V5A|1|CV|U|38
Current chains
- Chain CV
- P-SITE RNA ASL-PHE
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain CI
- 30S RIBOSOMAL PROTEIN S9
- Chain CM
- 30S RIBOSOMAL PROTEIN S13
- Chain CW
- Transfer RNA; tRNA
- Chain CX
- MRNA
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