HL_4V5A_247

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GUCUGCAACCCGAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|CA|G|1312
4V5A|1|CA|U|1313
4V5A|1|CA|C|1314
4V5A|1|CA|U|1315
4V5A|1|CA|G|1316
4V5A|1|CA|C|1317
4V5A|1|CA|A|1318
4V5A|1|CA|A|1319
4V5A|1|CA|C|1320
4V5A|1|CA|C|1321
4V5A|1|CA|C|1322
4V5A|1|CA|G|1323
4V5A|1|CA|A|1324
4V5A|1|CA|C|1325

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CM

30S RIBOSOMAL PROTEIN S13

Chain CN

30S RIBOSOMAL PROTEIN S14

Chain CS

30S RIBOSOMAL PROTEIN S19

Chain CU

30S RIBOSOMAL PROTEIN THX

Chain D4

50S RIBOSOMAL PROTEIN L31