HL_4V5A_254

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UAGGGGGCGCCUACCA

Length

16 nucleotides

Bulged bases

4V5A|1|DA|C|884, 4V5A|1|DA|C|897

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|DA|U|877
4V5A|1|DA|A|878
4V5A|1|DA|G|879
4V5A|1|DA|G|880
4V5A|1|DA|G|881
4V5A|1|DA|G|882
4V5A|1|DA|G|883
4V5A|1|DA|C|884
4V5A|1|DA|G|892
4V5A|1|DA|C|893
4V5A|1|DA|C|894
4V5A|1|DA|U|895
4V5A|1|DA|A|896
4V5A|1|DA|C|897
4V5A|1|DA|C|898
4V5A|1|DA|A|899

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DQ

50S RIBOSOMAL PROTEIN L16

Chain DZ

50S RIBOSOMAL PROTEIN L25