HL_4V5B_010

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CCAGUAGCGGCGAGCGAACG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|AB|C|239
4V5B|1|AB|C|240
4V5B|1|AB|A|241
4V5B|1|AB|G|242
4V5B|1|AB|U|243
4V5B|1|AB|A|244
4V5B|1|AB|G|245
4V5B|1|AB|C|246
4V5B|1|AB|G|247
4V5B|1|AB|G|248
4V5B|1|AB|C|249
4V5B|1|AB|G|250
4V5B|1|AB|A|251
4V5B|1|AB|G|252
4V5B|1|AB|C|253
4V5B|1|AB|G|254
4V5B|1|AB|A|255
4V5B|1|AB|A|256
4V5B|1|AB|C|257
4V5B|1|AB|G|258

Current chains

Chain AB

23S RIBOSOMAL RNA

Nearby chains

Chain A3

50S RIBOSOMAL PROTEIN L35

Chain AL

50S RIBOSOMAL PROTEIN L15