HL_4V5B_070
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- UUUGAUCAUGG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5B_070 not in the Motif Atlas
- Homologous match to HL_5J7L_001
- Geometric discrepancy: 0.172
- The information below is about HL_5J7L_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89881.5
- Basepair signature
- cWW-tHW-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
4V5B|1|BA|U|12
4V5B|1|BA|U|13
4V5B|1|BA|U|14
4V5B|1|BA|G|15
4V5B|1|BA|A|16
4V5B|1|BA|U|17
4V5B|1|BA|C|18
4V5B|1|BA|A|19
4V5B|1|BA|U|20
4V5B|1|BA|G|21
4V5B|1|BA|G|22
Current chains
- Chain BA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain BE
- 30S RIBOSOMAL PROTEIN S5
- Chain BL
- 30S RIBOSOMAL PROTEIN S12
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