HL_4V5B_095
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- GUGAUAAAC
- Length
- 9 nucleotides
- Bulged bases
- 4V5B|1|BA|U|1168
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5B_095 not in the Motif Atlas
- Geometric match to HL_3RG5_006
- Geometric discrepancy: 0.3915
- The information below is about HL_3RG5_006
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- tRNA anticodon loop
- Motif group
- HL_04259.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4V5B|1|BA|G|1164
4V5B|1|BA|U|1165
4V5B|1|BA|G|1166
4V5B|1|BA|A|1167
4V5B|1|BA|U|1168
4V5B|1|BA|A|1169
4V5B|1|BA|A|1170
4V5B|1|BA|A|1171
4V5B|1|BA|C|1172
Current chains
- Chain BA
- 16S RIBOSOMAL RNA
Nearby chains
- Chain BB
- 30S RIBOSOMAL PROTEIN S2
- Chain BG
- 30S RIBOSOMAL PROTEIN S7
- Chain DJ
- 30S RIBOSOMAL PROTEIN S10
Coloring options: