HL_4V5B_141
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- CGACACAG
- Length
- 8 nucleotides
- Bulged bases
- 4V5B|1|CB|A|1614, 4V5B|1|CB|A|1616, 4V5B|1|CB|A|1618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5B_141 not in the Motif Atlas
- Homologous match to HL_4WF9_038
- Geometric discrepancy: 0.2904
- The information below is about HL_4WF9_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89567.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
4V5B|1|CB|C|1612
4V5B|1|CB|G|1613
4V5B|1|CB|A|1614
4V5B|1|CB|C|1615
4V5B|1|CB|A|1616
4V5B|1|CB|C|1617
4V5B|1|CB|A|1618
4V5B|1|CB|G|1619
Current chains
- Chain CB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain C2
- 50S RIBOSOMAL PROTEIN L34
- Chain CS
- 50S RIBOSOMAL PROTEIN L22
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