HL_4V5B_179

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GGCGCAAGCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|DA|G|377
4V5B|1|DA|G|378
4V5B|1|DA|C|379
4V5B|1|DA|G|380
4V5B|1|DA|C|381
4V5B|1|DA|A|382
4V5B|1|DA|A|383
4V5B|1|DA|G|384
4V5B|1|DA|C|385
4V5B|1|DA|C|386

Current chains

Chain DA

16S RIBOSOMAL RNA

Nearby chains

Chain DP

30S RIBOSOMAL PROTEIN S16