HL_4V5B_206

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GGUUAACCGAAUAGGGGAGCC

Length

21 nucleotides

Bulged bases

4V5B|1|AB|A|613, 4V5B|1|AB|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|AB|G|604
4V5B|1|AB|G|605
4V5B|1|AB|U|606
4V5B|1|AB|U|607
4V5B|1|AB|A|608
4V5B|1|AB|A|609
4V5B|1|AB|C|610
4V5B|1|AB|C|611
4V5B|1|AB|G|612
4V5B|1|AB|A|613
4V5B|1|AB|A|614
4V5B|1|AB|U|615
4V5B|1|AB|A|616
4V5B|1|AB|G|617
4V5B|1|AB|G|618
4V5B|1|AB|G|619
4V5B|1|AB|G|620
4V5B|1|AB|A|621
4V5B|1|AB|G|622
4V5B|1|AB|C|623
4V5B|1|AB|C|624

Current chains

Chain AB

23S RIBOSOMAL RNA

Nearby chains

Chain A3

50S RIBOSOMAL PROTEIN L35

Chain AE

50S RIBOSOMAL PROTEIN L4

Chain AL

50S RIBOSOMAL PROTEIN L15