HL_4V5B_213

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

UGAAGACGACG

Length

11 nucleotides

Bulged bases

4V5B|1|AB|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|AB|U|2818
4V5B|1|AB|G|2819
4V5B|1|AB|A|2820
4V5B|1|AB|A|2821
4V5B|1|AB|G|2822
4V5B|1|AB|A|2823
4V5B|1|AB|C|2824
4V5B|1|AB|G|2825
4V5B|1|AB|A|2826
4V5B|1|AB|C|2827
4V5B|1|AB|G|2828

Current chains

Chain AB

23S RIBOSOMAL RNA

Nearby chains

Chain AD

50S RIBOSOMAL PROTEIN L3

Chain AN

50S RIBOSOMAL PROTEIN L17