HL_4V5B_219

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

UAGCUUAACCUUCGGGAGGGCG

Length

22 nucleotides

Bulged bases

4V5B|1|BA|U|1451

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|BA|U|1440
4V5B|1|BA|A|1441
4V5B|1|BA|G|1442
4V5B|1|BA|C|1443
4V5B|1|BA|U|1444
4V5B|1|BA|U|1445
4V5B|1|BA|A|1446
4V5B|1|BA|A|1447
4V5B|1|BA|C|1448
4V5B|1|BA|C|1449
4V5B|1|BA|U|1450
4V5B|1|BA|U|1451
4V5B|1|BA|C|1452
4V5B|1|BA|G|1453
4V5B|1|BA|G|1454
4V5B|1|BA|G|1455
4V5B|1|BA|A|1456
4V5B|1|BA|G|1457
4V5B|1|BA|G|1458
4V5B|1|BA|G|1459
4V5B|1|BA|C|1460
4V5B|1|BA|G|1461

Current chains

Chain BA

16S RIBOSOMAL RNA

Nearby chains

Chain AP

50S RIBOSOMAL PROTEIN L19

Chain BT

30S RIBOSOMAL PROTEIN S20