HL_4V5B_230

3D structure

PDB id

4V5B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of PDF binding helix in complex with the ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CUAGUACGAGAGGACCG

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5B|1|CB|C|2652
4V5B|1|CB|U|2653
4V5B|1|CB|A|2654
4V5B|1|CB|G|2655
4V5B|1|CB|U|2656
4V5B|1|CB|A|2657
4V5B|1|CB|C|2658
4V5B|1|CB|G|2659
4V5B|1|CB|A|2660
4V5B|1|CB|G|2661
4V5B|1|CB|A|2662
4V5B|1|CB|G|2663
4V5B|1|CB|G|2664
4V5B|1|CB|A|2665
4V5B|1|CB|C|2666
4V5B|1|CB|C|2667
4V5B|1|CB|G|2668

Current chains

Chain CB

23S RIBOSOMAL RNA

Nearby chains

Chain CG

50S RIBOSOMAL PROTEIN L6

Chain CK

50S RIBOSOMAL PROTEIN L14