HL_4V5G_137

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGCGAAAGCG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5G_137 not in the Motif Atlas

Geometric match to HL_8C3A_054

Geometric discrepancy: 0.1278

The information below is about HL_8C3A_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_71121.1

Basepair signature

cWW-F

Number of instances in this motif group

24

Unit IDs

4V5G|1|CA|C|1163
4V5G|1|CA|G|1164
4V5G|1|CA|C|1165
4V5G|1|CA|G|1166
4V5G|1|CA|A|1168
4V5G|1|CA|A|1169
4V5G|1|CA|A|1170
4V5G|1|CA|G|1171
4V5G|1|CA|C|1172
4V5G|1|CA|G|1173

Current chains

Chain CA

16S RIBOSOMAL RNA

Nearby chains

Chain CB

30S RIBOSOMAL PROTEIN S2

Chain CG

30S RIBOSOMAL PROTEIN S7