HL_4V5H_020

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_020 not in the Motif Atlas

Homologous match to HL_4LFB_020

Geometric discrepancy: 0.1169

The information below is about HL_4LFB_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4V5H|1|AA|C|897
4V5H|1|AA|G|898
4V5H|1|AA|C|899
4V5H|1|AA|A|900
4V5H|1|AA|A|901
4V5H|1|AA|G|902

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain BB

Large subunit ribosomal RNA; LSU rRNA