3D structure

PDB id
4V5H (explore in PDB, NAKB, or RNA 3D Hub)
Description
E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.
Experimental method
ELECTRON MICROSCOPY
Resolution
5.8 Å

Loop

Sequence
CUUCGG
Length
6 nucleotides
Bulged bases
4V5H|1|AA|U|1030
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_4V5H_023 not in the Motif Atlas
Geometric match to HL_5U3G_001
Geometric discrepancy: 0.2553
The information below is about HL_5U3G_001
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.5
Basepair signature
cWW-F
Number of instances in this motif group
19

Unit IDs

4V5H|1|AA|C|1028
4V5H|1|AA|U|1029
4V5H|1|AA|U|1030
4V5H|1|AA|C|1031
4V5H|1|AA|G|1032
4V5H|1|AA|G|1033

Current chains

Chain AA
16S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

Coloring options:


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