HL_4V5H_027

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UGAUAAA

Length

7 nucleotides

Bulged bases

4V5H|1|AA|U|1168

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_027 not in the Motif Atlas

Homologous match to HL_4LFB_027

Geometric discrepancy: 0.2122

The information below is about HL_4LFB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

4V5H|1|AA|U|1165
4V5H|1|AA|G|1166
4V5H|1|AA|A|1167
4V5H|1|AA|U|1168
4V5H|1|AA|A|1169
4V5H|1|AA|A|1170
4V5H|1|AA|A|1171

Current chains

Chain AA

16S RIBOSOMAL RNA

Nearby chains

Chain AB

30S RIBOSOMAL PROTEIN S2