HL_4V5H_040

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

4V5H|1|BB|A|125, 4V5H|1|BB|A|126, 4V5H|1|BB|A|127

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_040 not in the Motif Atlas

Homologous match to HL_4WF9_003

Geometric discrepancy: 0.1671

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

4V5H|1|BB|G|123
4V5H|1|BB|G|124
4V5H|1|BB|A|125
4V5H|1|BB|A|126
4V5H|1|BB|A|127
4V5H|1|BB|C|128

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B6

50S RIBOSOMAL PROTEIN L34