HL_4V5H_043

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

4V5H|1|BB|A|196

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_043 not in the Motif Atlas

Geometric match to HL_7RQB_006

Geometric discrepancy: 0.1278

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

4V5H|1|BB|G|194
4V5H|1|BB|A|195
4V5H|1|BB|A|196
4V5H|1|BB|A|197
4V5H|1|BB|C|198
4V5H|1|BB|A|199
4V5H|1|BB|U|200
4V5H|1|BB|C|201

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B0

50S RIBOSOMAL PROTEIN L28

Chain BL

50S RIBOSOMAL PROTEIN L15