HL_4V5H_053

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GCUUAGGC

Length

8 nucleotides

Bulged bases

4V5H|1|BB|U|546, 4V5H|1|BB|G|549

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_053 not in the Motif Atlas

Geometric match to HL_2PJP_001

Geometric discrepancy: 0.3695

The information below is about HL_2PJP_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56131.2

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

4V5H|1|BB|G|543
4V5H|1|BB|C|544
4V5H|1|BB|U|545
4V5H|1|BB|U|546
4V5H|1|BB|A|547
4V5H|1|BB|G|548
4V5H|1|BB|G|549
4V5H|1|BB|C|550

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BJ

50S RIBOSOMAL PROTEIN L13

Chain BR

50S RIBOSOMAL PROTEIN L21