HL_4V5H_055

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

4V5H|1|BB|A|613, 4V5H|1|BB|U|615

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_055 not in the Motif Atlas

Homologous match to HL_5J7L_151

Geometric discrepancy: 0.2987

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

4V5H|1|BB|C|611
4V5H|1|BB|G|612
4V5H|1|BB|A|613
4V5H|1|BB|A|614
4V5H|1|BB|U|615
4V5H|1|BB|A|616
4V5H|1|BB|G|617

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain BE

50S RIBOSOMAL PROTEIN L4