HL_4V5H_064

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

GAAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_064 not in the Motif Atlas

Homologous match to HL_7A0S_027

Geometric discrepancy: 0.2164

The information below is about HL_7A0S_027

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47171.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

4V5H|1|BB|G|978
4V5H|1|BB|A|979
4V5H|1|BB|A|980
4V5H|1|BB|A|981
4V5H|1|BB|C|982
4V5H|1|BB|A|983
4V5H|1|BB|A|984
4V5H|1|BB|C|985

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B2

50S RIBOSOMAL PROTEIN L30

Chain BQ

50S RIBOSOMAL PROTEIN L20

Chain BR

50S RIBOSOMAL PROTEIN L21