HL_4V5H_077

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

4V5H|1|BB|A|1614, 4V5H|1|BB|A|1616, 4V5H|1|BB|A|1618

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_077 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.1882

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

4V5H|1|BB|C|1612
4V5H|1|BB|G|1613
4V5H|1|BB|A|1614
4V5H|1|BB|C|1615
4V5H|1|BB|A|1616
4V5H|1|BB|C|1617
4V5H|1|BB|A|1618
4V5H|1|BB|G|1619

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain AZ

POLY-ALA NASCENT CHAIN

Chain B6

50S RIBOSOMAL PROTEIN L34

Chain BS

50S RIBOSOMAL PROTEIN L22