HL_4V5H_083

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

4V5H|1|BB|A|1808

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_083 not in the Motif Atlas

Homologous match to HL_4WF9_044

Geometric discrepancy: 0.2524

The information below is about HL_4WF9_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5H|1|BB|C|1806
4V5H|1|BB|G|1807
4V5H|1|BB|A|1808
4V5H|1|BB|A|1809
4V5H|1|BB|A|1810
4V5H|1|BB|G|1811

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B0

50S RIBOSOMAL PROTEIN L28

Chain BC

50S RIBOSOMAL PROTEIN L2