HL_4V5H_088

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

4V5H|1|BB|A|2147

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_088 not in the Motif Atlas

Geometric match to HL_8CRE_038

Geometric discrepancy: 0.2863

The information below is about HL_8CRE_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4V5H|1|BB|C|2143
4V5H|1|BB|G|2144
4V5H|1|BB|C|2145
4V5H|1|BB|C|2146
4V5H|1|BB|A|2147
4V5H|1|BB|G|2148

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains