HL_4V5H_090

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

4V5H|1|BB|G|2250

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_090 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.1594

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5H|1|BB|C|2248
4V5H|1|BB|U|2249
4V5H|1|BB|G|2250
4V5H|1|BB|G|2251
4V5H|1|BB|G|2252
4V5H|1|BB|G|2253
4V5H|1|BB|C|2254
4V5H|1|BB|G|2255
4V5H|1|BB|G|2256

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain AV

Transfer RNA; tRNA

Chain BM

50S RIBOSOMAL PROTEIN L16

Chain BY

50S RIBOSOMAL PROTEIN L27