HL_4V5H_097

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

AGUUCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_097 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.3415

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_52011.1

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4V5H|1|BB|A|2471
4V5H|1|BB|G|2472
4V5H|1|BB|U|2473
4V5H|1|BB|U|2474
4V5H|1|BB|C|2475
4V5H|1|BB|A|2476
4V5H|1|BB|U|2477
4V5H|1|BB|A|2478
4V5H|1|BB|U|2479

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains

Chain B8

50S RIBOSOMAL PROTEIN L36

Chain BG

50S RIBOSOMAL PROTEIN L6

Chain BM

50S RIBOSOMAL PROTEIN L16