HL_4V5H_104

3D structure

PDB id

4V5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide.

Experimental method

ELECTRON MICROSCOPY

Resolution

5.8 Å

Loop

Sequence

UUUAA

Length

5 nucleotides

Bulged bases

4V5H|1|BB|A|2799

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4V5H_104 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.1765

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

4V5H|1|BB|U|2796
4V5H|1|BB|U|2797
4V5H|1|BB|U|2798
4V5H|1|BB|A|2799
4V5H|1|BB|A|2800

Current chains

Chain BB

23S RIBOSOMAL RNA

Nearby chains