HL_4V5M_003
3D structure
- PDB id
- 4V5M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.8 Å
Loop
- Sequence
- GGAAAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4V5M_003 not in the Motif Atlas
- Homologous match to HL_4LFB_003
- Geometric discrepancy: 0.2232
- The information below is about HL_4LFB_003
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 335
Unit IDs
4V5M|1|AA|G|158
4V5M|1|AA|G|159
4V5M|1|AA|A|160
4V5M|1|AA|A|161
4V5M|1|AA|A|162
4V5M|1|AA|C|163
Current chains
- Chain AA
- 16S RRNA
Nearby chains
- Chain AT
- 30S RIBOSOMAL PROTEIN S20
- Chain BT
- 50S RIBOSOMAL PROTEIN L19
Coloring options: