HL_4V5O_058
3D structure
- PDB id
- 4V5O (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.93 Å
Loop
- Sequence
- AGAAAU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_54105.2
- Basepair signature
- cWW-tSH-R-R
- Number of instances in this motif group
- 298
Unit IDs
4V5O|1|BA|A|1056
4V5O|1|BA|G|1057
4V5O|1|BA|A|1058
4V5O|1|BA|A|1059
4V5O|1|BA|A|1060
4V5O|1|BA|U|1061
Current chains
- Chain BA
- 18S RRNA
Nearby chains
- Chain B5
- RIBOSOMAL PROTEIN S26E CONTAINING PROTEIN
- Chain BE
- RIBOSOMAL PROTEIN S5 CONTAINING PROTEIN
- Chain BH
- RIBOSOMAL PROTEIN S8 CONTAINING PROTEIN
Coloring options: