HL_4V5O_065

3D structure

PDB id

4V5O (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH INITIATION FACTOR 1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.93 Å

Loop

Sequence

GUGCAAUAAGCC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37723.1

Basepair signature

cWW-R-R-tSH-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

4V5O|1|BA|G|1364
4V5O|1|BA|U|1365
4V5O|1|BA|G|1366
4V5O|1|BA|C|1367
4V5O|1|BA|A|1368
4V5O|1|BA|A|1369
4V5O|1|BA|U|1370
4V5O|1|BA|A|1371
4V5O|1|BA|A|1372
4V5O|1|BA|G|1373
4V5O|1|BA|C|1374
4V5O|1|BA|C|1375

Current chains

Chain BA

18S RRNA

Nearby chains

Chain BG

RIBOSOMAL PROTEIN S7 CONTAINING PROTEIN

Chain BR

RACK1

Chain BV

RPS17E